PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G070300.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 479aa    MW: 52686.3 Da    PI: 6.0328
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G070300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46e-09294342355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Aqcoe3G070300.2.p 294 NSHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 342
                        58*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.82E-11289346No hitNo description
SuperFamilySSF474594.45E-17289359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.478291341IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.0E-17292358IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-6294342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.5E-10297347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MDLSDKDKFG LEKRDGDPLN YHSSNISPEW QFGNANQSNQ PMGLVSINPS AAYDRNAISS  60
PVSMVDSFCL DGSNIQSRGN PFFQTGGEIM PRNLSQFPAD SNFIQRADRF SCFNGGSFSD  120
VVNPYNISKS MNNYSKDGAM IRGSSEALSP NALKNALGVQ TQTKEKTDDV AGFVRATDET  180
TNECKMSNET EVSGSDRQVK PSLLETPGEP SASKGQTVKK RKRICQGTEI DRTEGSPQLQ  240
SETAQDDNET EQKNGQKRSN VGKTTRHGKE SSQNSDAAKE DYIHVRARRG QATNSHSLAE  300
RVRREKISER MKFLQDLVPG CNKVTGKAVM LDEIINYVQS LQRQVEFLSM KLATVNPRLD  360
LNIEGLLAKE IHQSRGCPSM FPFSPDTNIG HSQLNPSQQR LSQAGFPGTG NTTDALRRQV  420
SSQMMTINGG GYTESTQIPN MWDEELNNVL QMNFGTTASF NSQDLNGSLS SDQMKVEI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261463.11e-169PREDICTED: transcription factor bHLH49
RefseqXP_010261471.11e-169PREDICTED: transcription factor bHLH49
RefseqXP_010261481.11e-169PREDICTED: transcription factor bHLH49
TrEMBLM5XLG41e-146M5XLG4_PRUPE; Uncharacterized protein
STRINGVIT_01s0010g00740.t011e-141(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.36e-93bHLH family protein